YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94733403
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEEAAGRQPM SQPMMQMAPP PYLPTQDPNM PPHPPPPGCA PQPNYPPPPP PPGSDGYLQE  60
   61 TQFHSGTLGP QGAPNGYPVQ THGPVGTVPH PPVGYLHPGY PLQLQPCTAY VPVYPIGTGA 120
  121 QPYMPNGAPH PGVAPGQMAM HMPNGIALME SRRPPHDYLP IAVLTTVCCF WPTGIIAIIK 180
  181 AVQVRTAIAR GDMVTAEIAS REARNFSFIS LAVGIASIVL CTILTVVVII ASQHHDDDWE 240
  241 P

Type	Start	End	Confidence
Non-Cytoplasmic	1	157	0.67
Transmembrane Helix	158	182	0.76
Cytoplasmic	183	207	0.80
Transmembrane Helix	208	231	0.93
Non-Cytoplasmic	232	241	0.81