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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94733332
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARPALSFL LAVLACTGPA QPSPPLLLRP RERERDSGGA SGGVNIAVVH SGSSHLPETS  60
   61 AGVGGVGGAS SAGSGSGAGP SSSSGSSGTA FLSRAWSGQV GESVMTPWGP ANVIWLAVNE 120
  121 SSPGSLLLQL CELLATTPLQ GLVFEEEKPP PPNRAPLAPM LEFVSAQTGV PVIAVGGGAG 180
  181 LGREPQESGS VYLQFSCSTD LQLEVIFEVL EEFDWTAFSV VTTRHHGYED FLAMVEGMID 240
  241 GSFIGWERKS VVMLNLTDDP GGARTRRLLK ENEAQVRLLY CSQEEAEQIF KAAWASGQAT 300
  301 PSHMWFAVGP GLSGLGLEGL PKALFAVRPQ GWRDEPRRRI AKGVSVLTHG AMALRREYGG 360
  361 ARGTSFAGNC MMDGNQTQRV PGRIRFFSNI TLSGRDYSFN NDGYLANPLL DVISYTAGRG 420
  421 WEEVGWWENG VLRLRYPPWS RYGPFLKPLD DSQHLRVVTL EERPFVIVEP ADPGTGSCIR 480
  481 DSVPCRLPLN NSMVVEGIQS MKHCCKGFCI DVLKRLAKIV GFTYDLYLVT NGRHGKNIDG 540
  541 QWNGMVGEVV SKRADMAIGS LTINEERSEV VEFSVPFVET GISVMVSRSN GTVSPSAFLE 600
  601 PYSPAVWVMM FVMCLSVVAV TVFIFEFFSP VGYNRSLQSG KTAGGSKFTI GKSIWLLWAL 660
  661 VFNNSVPVEN PRGTTSKIMV LVWAFFAVIF LASYTANLAA FMIQEEYIDT VSGLSDKKFQ 720
  721 HPTEQYPPLR FGTVPNGSTE ENIRSNYPNM HQYMVRNNQR GVEDAIENLK TGKLDAFIYD 780
  781 AAVLNYMARK DEGCKVMTIG SGKVFATTGY GVALHKNSRW KRPLDLALLQ LVGDDEIDML 840
  841 ERLWLSGICH NDKIEVMSSK LDIDNMAGVF YMLLVAMGLS LLVFAWEHLV YWKLRHCLGR 900
  901 TRGLDFLLAF SRGMYSCCNF EDETAPGGSQ STLPQYHHVS TVPPPPPPHV ISTAVANPPI 960
  961 AMAQQLPQQQ QKQHHQQPPV YSALLPGSPP SGGHSAMALG PSNSPILGAP MPCSTFLPRH1020
 1021 DRRLAVVDRW TRPKVGSEKP SGVSGGITDL TPFQGMPPHW GAGITGGEGG LDEYKRYYGP1080
 1081 IDPEGLGVSV EPQNLGTQTP KTKHRGTKSS GNPRLPPKGQ TSGHTINPAL QHPSPPQQSV1140
 1141 WRRSSLSKRK GSGGPLYENI LPLGRRGGGR YGIRDGGGRR GRRPPPLPLP IPVPLSSPTQ1200
 1201 TPPTPSPSIC YTSTSSSSSS TSSSSSSSES ISRSNSPSSS SSYTSSQSFR YRADVRDLYE1260
 1261 DYDTDELTEE SSLLLGRRKS RSRMSSRSLP SSPPPPPIPP RKPCALRPQV RDRAGSQLAQ1320
 1321 LQEWWASWGE KEKGRRAAGD REVKEEKRHH KERERERKRR KKGRKKKKRE DRERERERKR1380
 1381 RKVKKKKKKE EKARKREREK RSEQEEVDVD RKDVFEKGIG QEYSSYPAPR RSSFRKKSES1440
 1441 STRSYEWDRD AVKRDRDDQG GDDEEGSRGK ERHQRSPKSH RHSRPRSNNK HFSASNKPPS1500
 1501 TVKFWGSGNP TSESPSSFVP LLPIASKRRK SVGTERDERG RGGESRPLLG KNGRGKPCSR1560
 1561 EGLSFHEWDS EEEDEESEME RNRAEEQGRR RESRGMDSES ERDREKTVEI YTDDEGSSGE1620
 1621 FGKFERYWEG HEGRAVGGIG GGGWFFGTYP ARERGGSINS RDDSFLGWGG GESSLGFGTG1680
 1681 WGSGGLGSNQ WPQTPLTPPP PRRYWSVDKL PVKTEKKSKS RSQEKSRGHT SCSCQSPHHS1740
 1741 ASAHSKWNRV TSRSQEELLP HCHSFSSSVR PKRQSSKQDR AQSQAKSGSQ SNLHKVAQRP1800
 1801 QRADRSRQPP SPPQSLPPSL PSPMVPALPA PPSSSHHIHV PPPTSSSSVS SPSVISSTPG1860
 1861 APQPSSLSSS SAKLQYQKLR SVPQPQ

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