YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94733064
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKVTHQQVQ EPLSGSALLP CVFTLSPSPS HEPPRIKWTK LWGQRGPDGL QKQQSILVAK  60
   61 DNIIKVKKAF QGRVTLPGYP GNRYNASLVL TGLRSSDSGM YRCEVVVGIN DEQDTVPLQV 120
  121 TGVVFHYRAP HNRYALSFSD AKRVCVENSA NIATPAQLQA TFDDGYDNCD AGWLSDHTVR 180
  181 YPIQSPRPGC FGDREDSPGV RNYGTRAPDE MFDVYCFANS LQGEVFHTSV PEKLSLASAS 240
  241 THCHTLGAQL ATVGQIYLAW QAGLDRCDPG WLADGSVRYP INLPRRNCGG DEPGVRTVYH 300
  301 NPNRTGFPDT TDLFDAYCFQ

Type	Start	End	Confidence
Signal Peptide	1	30	0.62
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	320	0.99