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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|130502124, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRCDLGRMD KEKTSVTRCG RMWKLCSSTR HPALLVCIVL EIFIHSVKGL NVCMSGSATS  60
   61 CEECLLIHPS CAWCAQEDFG QARTLTSRCD FSQNLQKRGC DAPFIENPRS GSSVLQSKPL 120
  121 SYKGSGVTQY DVIQIYPQKI SLSLRPGDQA SFEVQVRPVE DYPVDLYYLM DLSLSMKDDL 180
  181 DTIRNLGTKL AEEMRKLTSN FRLGFGSFVD KNISPFSYTA SKYQDNPCNG YKLFPNCVPT 240
  241 FGFRHLLSLT DKVDRFNEEV QKQMVSRNRD APEGGFDAIL QAAVCREKIG WRKEAYHLLV 300
  301 FATDDVPHLA LDGKLGGLVH PHDGQCHLND KNEYSASTKM DYPSLALLGE KLAENNIFLI 360
  361 FAVIKRHYVL YKNLTALIPG TTVEILDQDS KNIIQLIVNA YNNIRSKVEL SVWDHPEDLS 420
  421 LAFSATCQDG QPLTGLRKCA DLKIGDTVSF NVTVDARGCP PKGTRKSFTI RPVGFKDRLE 480
  481 VSVDYRCDCR CTYHTKPNSS RCNSAGTYNC GLCRCEPGYL GARCECQEGE VDHQHLSACR 540
  541 EAEGKQVCSG RGECSCNQCL CYESEFGKIY GTFCECDDFS CARHKGILCS GHGECHCGEC 600
  601 KCHAGYIGDN CNCSTETASC VSDDGKICSG RGSCVCGRCQ CTEPGAFGDT CEKCPTCPDA 660
  661 CGTKRECIEC RLFNTGRLAD NQTCQRMCKD EITTVETLKT DDPNAVQCVY KTENDCVMKF 720
  721 TYSEHANGQS VLTALKEPEC AVAPNAMTVL LAVVGSILLM GIVLLALWKL VITVHDRREF 780
  781 ARFQSARSRA RYEMASNPVY KRSVPMETDF DMHGIKSLNG GVH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle