YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94732976, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHCGLRAMR ALTAVFGVLI VLKETEAWGY KNGILHNSIW LEQAAGVYHR ESRKGRYQLT  60
   61 YKEAKAVCNF EGGTLATFDQ LEAARQIGFH VCAAGWLDKG RVGYPIVKAG SNCGFGKVGI 120
  121 IDYGYRLNKS ERWDVYCYNP VAKECGGVHT DPEKVLVSPG YPDEYQDEQI CYWHIRVRFG 180
  181 HRIRLHFLDF DIEEDTDCLS DHLEIYDSYD DVSGFVGRYC GDQLPDDFIS TGNVMTLKFR 240
  241 SDSSVTAGGF KLQYISVNSS QLFDLLADSF S

Type	Start	End	Confidence
Signal Peptide	1	27	0.96
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	271	0.99