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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94732893
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPMSHLYYK KSSYSPYRDR IPLQIVRAEV ELSPEERAFL SAVEKGDYAG VQHALREAEV  60
   61 YYNIDTNCVD PLGRSALLIA IENENLEVME LLLDHGVNTG DALLYAIRKE VVGAVELLLS 120
  121 HRKPSGEKQV PSLMMDAQFS EFTPDITPIM LAAHTNNYEI IKLLVQRKVT IPRPHQIRCD 180
  181 CVECVSSSEV DSLRHSRSRL NIYKALASPS LIALSSEDPI LTAFRLGWEL KELSKVENEF 240
  241 RQEYEELSQQ CKLFAKDLLD QARSSRELET ILNHRDDQSE ELDPRECRDL AKLKLAIKYH 300
  301 QKEFVAQPNC QQLLATLWYD GFPGWRRRHW AVKLVMCFII GLLFPVFSLV YLLAPKSTLG 360
  361 LFIKKPFIKF ICHTASYLTF LFLLLLASQH IARTNLHMQG PPPTVVEWMI LPWVLGFIWA 420
  421 EIKEMWDGGF NEYVHDWWNL MDFAMNSLYL ATISLKIVAY VKYNSSRPRE EWEMWHPTLI 480
  481 AEALFAIANI FSSLRLISLF TANSHLGPLQ ISLGRMLLDI LKFLFIYCLV LLAFANGLNQ 540
  541 LYFYYETEAA DEPNHCKGIR CERQNNAFST LFETLQSLFW SVFGLLNLYV TNVKARHEFT 600
  601 EFVGATMFGT YNVISLVVLL NMLIAMMNNS YQLIADHADI EWKFARTKLW MSYFDEGGTL 660
  661 PPPFNIIPSP KSFWYLCRWV HGRLCGSETA PPEEDTHKHE NLKEFTVKKA EKHADRLIQN 720
  721 QHYQEVIRSL VKRYVASMIR SAKTSEGLTE ENFKELKQDI SSFRYEVLDL LGNRKPPRRN 780
  781 YSSSSEATLR DEVSDDGEAR HHSDGSSIGA KGVSFKTITP SDPSYGVSAL FHSISGMEAA 840
  841 GTTREGKPKI NGLRKNPSPS SSLSSVAPAR APALSRTWRR FSRFSSSKKN SFRRLGLLFS 900
  901 RMGSHLPQPT GVTAATYTIS DGLLHPPGAW HDLGFTRGDG PVTRSETNLN QVATLNEGGI 960
  961 GIGGSGVGMS TNGQRANGRD VLLTLGPLSP PSSLHCASSF SASSSRLLDS NEDVFQGLVG1020
 1021 PCVGQMPHSS SCWVTEQDDS VTTQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle