YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94732878
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRLCDVAS LLRSGSWAAE PWTGQVIAAM ETQLSNGPSC TSSNGPNSVS NTCTSPVEMP  60
   61 NGSEDSKTNL IVNYLPQNMT QEELKSLFGS IGEIESCKLV RDKITGQSLG YGFVNYMEPK 120
  121 DAEKAINTLN GLRLQTKTIK VSYARPSSAS IRDANLYVSG LPKTMTQKEL EQLFSQFGRI 180
  181 ITSRILVDQV TGVSRGVGFI RFDRRVEAEE AIKGLNGQKP PGATEPITVK FANNPSQKSS 240
  241 QALLSHLYQS PNRRYPGPLA QQAQRFRLDN LLNMAYGVKR FSPMTIDGVT SLAGINLPAH 300
  301 AGTGWCIFVY NLAPDADENV LWQMFGPFGA VTNVKVIRDF NTNKCKGFGF VTMTNYDEAA 360
  361 VAIASLNGYR LGDRVLQVSF KTNKTHKA

Type	Start	End	Confidence
Signal Peptide	1	18	0.92
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	388	0.99