YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94732559
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRQLFTKHLR RATQEVEAMY EFLSCPSTYA LGTFAILWVL VWFYRDNLKI TRVSEKHVFV  60
   61 TGCDSGFGNL LCKRLDKRGF RVLAGCLTEK GADDLKRAAG PFLKTCILDV TSSASIQKAM 120
  121 EWTKKEVGDK GLWGLVNNAG RSLPMGPSEW MKIEDFESTL KVNMTGVIET TMTFLPLVKK 180
  181 ARGRVVNVAS VLGRVAANGG GYCISKFAVE SFSDCLRRDI QGFGVNVCII EPGFFKTQVT 240
  241 SLEPIERELH RLWNQLTPEV KESYGDKYLD KYIWIQRLIM NAICDSDLSK VTNCMEHALL 300
  301 AVHPRTRYSA GWDAKFLWIP LSYMPACFVD IALKLVMPKP AKGV

Type	Start	End	Confidence
Cytoplasmic	1	19	0.83
Transmembrane Helix	20	42	0.89
Non-Cytoplasmic	43	344	0.87