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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kcnl-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKLQAIIFG FCFNSDAKIL IDEDDRYVNG GVRFDNDVIE EGTASGAASG GVGTPKKIAG  60
   61 FRRRQSGYGI AISSDSTAKM RCRLRKQLFI RRNKVCDISL FLAVLGLLLV IIDSELTALS 120
  121 SSTGITKDSP ISIILRSACV VSTFFLICCL INYHAIEVKI ALIDSGADDW RVAFSTDRFI 180
  181 KMLIEVCVCM ICPFPEIFSD GLMKMPYINA DTRQVKMRDV PIDVLLSVPM FLRSYLVCRF 240
  241 MVLHSKQFQD AATRSIAALN RISMDFRFVI KTMMADHPLR VLIVFTLSYW MCMSWMFTQC 300
  301 ERYDGQLEVE HYYLNSMWFI MVTFMSIGYG DIVPNTYCGR CLSITTGIVG AGVSSALIAI 360
  361 ISRKLELSRA EKHVNNFMAD SKLTNQRKNA AASVLQETWF IHKYKKALHK GDDLRLRHHQ 420
  421 RRFLHSINEF RRIKWDQRKL QEKGNSLLDV GKLHSDMHET LWEMHRTQDH FISQIDVLTQ 480
  481 KIMELQMTLN TRPPCCAPPT SSSNDAYFST STQLGTVLPT VIPTIPLPPT QSPMLHASQS 540
  541 HREPLQVTTT TTTSSDGLPR ISVGSTSSTA TSASSGNGSL PQCTVDQLSN CPTGGIYATV 600
  601 TTPLISNFEE V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle