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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE39478
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTNLAQTPM MMTQARVLST GTTDNGTIRY DEVDETKRWF NRRFCFLTVI GIAVLLLAMV  60
   61 VIVVIVLLLT QLKAANSNAQ NAMSSSKVQL EELTRKLSQP LEQLGPTLER LSNMPGFPMG 120
  121 PSPTTQTPPG VPPISPIVTG PNTTPESPRR SPKARYEWKG CQNLGKCELS GYTKPPLVIL 180
  181 SLDGFAREYV DRNIVQTLNH IADCGVKADK VYPSYPSKTF PNHYSIVTGL WPESHGITDN 240
  241 SVFDPTISPV LESMKSTKYE KFFEGEPIWS VYKRKTGKKA NCLFWVGCAY NNSGYAPDVA 300
  301 PAYNQELPFR NRIDTVVEWL KLPVDERPGL ITAYLHEPDN AGHYQVDEED VDEKLAEIDE 360
  361 NLDYLMSRLS EEKLLECINF AILSDHGMQL IDKTYYFQDY LDLKGLITAK GVVGRVYIND 420
  421 TTISVNDVVD KFRCKIDTVK TNTRSDVPTR KHYSRDPRVG EVLLEGRAGV TFYKSKADDY 480
  481 ELSGDHGYDY FNPKMHTIFY ARGPSFKQNT TISPYQNIQY MNLWMNLLGI EGAVETNGTI 540
  541 GFFDNILTNP PRRDNPTNVI GECPMIAFPS VLKCSGNVSA ETLNQLSVKL TNCAFSPTNI 600
  601 PLYSDNHCFQ NYCDNSVIVS RKGNDARRAI IEVLSRDEAS NPSNFTFLNA KYQSNCPSHI 660
  661 PTGSLTIRQN SQLSSMVDER IDVPNNFLLK VLDPLQAKSM EYLNKFGKMY VISGTATDIN 720
  721 HDGIADSNGS VITHIYRIML ICNSTWLLMN PPLCTDSDSM DTLSFIFPIT EQSTIDCMSS 780
  781 DDILLDYTAT IFDVERISGF QFGIGALSQN QNTIIRRKIS TKLW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle