YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91203621
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFSISVIIP TYNAEKTIGQ CLHALKQQNY PSASYEVILV DDGSKDATGE IARTYDIKYL  60
   61 RQENSGPATA RNKGAIVAKG EIILFTDSDC VPEPDWIREM AAPFNDKSVM AVKGAYRNRQ 120
  121 KSIVARFAQL EFEERFEMLK KAASIDMVDT YSAGFRKDAF LQLGGFDTSF PVANNEDTEL 180
  181 SYRMSKLGFK MVFNPNAIVF HLDHPASVKR YARLKFWRGY WRTVVYKKFP GKMLKDTYTP 240
  241 QTLKLQILFL FLFLMSISFS VFSPTGLYAA FGAGAFFFLL SLPLMILGVR KDCLVGLCVP 300
  301 FLLVLRAGAL GFGMLWGMVR TRFH

Type	Start	End	Confidence
Cytoplasmic	1	241	0.92
Transmembrane Helix	242	262	0.87
Non-Cytoplasmic	263	266	0.75
Transmembrane Helix	267	288	0.89
Cytoplasmic	289	295	0.74
Transmembrane Helix	296	318	0.90
Non-Cytoplasmic	319	324	0.86