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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91203275
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIRHKLVII LAVLLIALNG IVGFFIYKQT RQEFTKEIRG KAKMLVIQLE TTRNYLASIM  60
   61 HKIELNEQTK KFIPAVATNA ISKNFAEKTG YVIKQTSLRY RNEENKPDLF EEKILRKMEE 120
  121 DPTIKEYWAD DVFDGKRVER YLYPLYVTKD CLLCHGPREK APPVVRDYYD AGYDYQLGEI 180
  181 RGAFSVIIPK EIAEQRYAAA IIFFIIIGTA SILLVVVIIF FTTNKFLKPI EKLTAAATAI 240
  241 KKTGDLTTRV EISTNDEVGQ LGEAFNDMSD KLRSSYAMLE QRITEKTEHL QKAVSALKRA 300
  301 NRMKSEFLAN MSHELRTPLN AIIGFAEVLK DKLCGELNAE QEDFVKDIHS SGRHLLQMIN 360
  361 DILDLSKIEA GKMELQYESF LVSDAIEDVY TILKGLAKKK QLQLKTVIQE DVKDIEADRV 420
  421 KFKQILYNLL SNSIKFTPQN GTITTNAAIV DGKMQVSVSD SGIGIKPEDR EKVFKEFWQA 480
  481 DSSFSRKYEG TGLGLALTRR IVEMHGGKIW LKSEYGKGST FYFTIPVTKS QRILHPEDEM 540
  541 ATVCPICGEE VGDEGTHVHK LSPVVTKGKK TILVIEDNRM SANLLTLYLT NAGYNVVVTA 600
  601 DGVGAVEKAK QCNPFLITLD ILLPGIDGWE VISKLKGDKD TAHIPVIIVS IFDNKELGYS 660
  661 LGAAEYLIKP VGRKQLVDAV NAVANTLKTK EEPVKILVVD DDEKAVKHIT TILKEKGCDV 720
  721 LKAYSGEAGI NLALEKHPDI IILDLMMPGM SGFEVIEILK AHPVAKEIPI IICSAKDITP 780
  781 EEKKELNGNI LALIQKGSHT EEDLLMAIRK IEQTHHKG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle