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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91203200
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKEFHSKGT YVRLLCYLKP YWRRVIVILL LSIISAFVAV LPIQILGIAV DEIRMADRHA  60
   61 NRNVETTHAL SLPAQKANMS GDEPVLKKKY SIPMAKPLLK MSGYIHNHWF LEHNAIMVTL 120
  121 VFLASGFLVL HAISSCISLA HGYITSELGQ RLVYDMRNQL YGHIQQFPLS YFENNKTGDI 180
  181 MSRIMNDVNS LEQAIVGPVI TFITDMFKFF WIIYFCMKLD WQLTCIVLFV CPFISLCTYS 240
  241 FGKRIRRVFR SLREKTGDLN ALIQDNISGI RVIAGFAKET EELERFKHKN YENYFLHVRI 300
  301 LRLVNTLRPA VDFITETGAV AVICLGGYKV LQGQLSAGTF VIFFPYLQMM YGPITGLTRF 360
  361 YNQVQRAIAS TERVFEALDT PVELQDAPDA LPLPVVQGFV EFKHVHFMYG KDKEVLTDIN 420
  421 ITACPGQMIA FVGPSGSGKT TLTKLLPRFY DPVKGDIFID GHNIKNVTLH SLRKQMAMVL 480
  481 QETFLFNDTV RINIAYARSD ASDRDVEYAA KAANAHDFIM QLPNGYESII GERGVKLSGG 540
  541 QKQRIAIARA ILANPRILIL DEATSSVDTE TEQLIQNAIY RLVKNRTTFI IAHRLSTILH 600
  601 ADRIVVLENG RIVEAGLHQE LLANNGLYKK LFEMQFDTQE KIKPKPETET GEGMKIPEPV 660
  661 IDIEELRQTM EW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle