YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91202488
Protein type:	Transmembrane
Type Confidence:	0.53
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLRFVFGKS SKRVLTNIFK ITACKGGAGM NNYLIPLFIL IVLGINGALC GESKNSDSDT  60
   61 THKKYEMATF AGGCFWCMQQ PFDQLEGVIS TAVGYTGGNV ENPAYEDVYS GRTGHAEAIE 120
  121 IWYDPSLISY ASLLQVFWRN IDPTAMNRQF ADVGSQYRTA IFYHTEEQKN LAESSKKELE 180
  181 KSGKFNKPIV TEIVPASAFY KAEEYHQKYY EKNQTQYNRY KYGSGRERYL KEKWEKDAK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.49
Transmembrane Helix	21	45	0.43
Non-Cytoplasmic	46	239	0.93