YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91202476
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKGSLVALV TPFNNGQVDY KKLKELVEFH IENGTNGIVP CGTTGEAATL SFEEHEQVVS  60
   61 EVVNYVSGRI PVIAGAGSNN TKEAIHLTKH ARKTGADGAL VITPYYNKPT PEGLYRHYKA 120
  121 IAEEVDIPIV IYNVPSRTGI SILPETVARL AEMKNIVAIK DASGNIDQAT KISQLCNITV 180
  181 LSGEDSLILP IMSVGGKGVI SVTANIAPSD TAALVRHCLE GNFGKALEYH YKLFPLCKGM 240
  241 FIETNPIPVK TAMKLLGRLN GEMRLPLCEI TKENEERLKT VLEDYGLLS

Type	Start	End	Confidence
Signal Peptide	1	16	0.57
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	289	0.99