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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91201994
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTELQWHTMH ANEVIKNLDT SVDAGLSLNE TENRLKKYGY NQLEEKKGVS PFILFLGQFN  60
   61 NFIVWVLIAA AIVSGVLREW IDALAIIAIV IINAIIGFIQ EYRAEKSLEA LQKMSAPFSR 120
  121 VTRNGEIQSI PSRDIVPGDI VLLEAGDYVP ADGRLCSSFS FMTQEASLTG ESTPVGKSTE 180
  181 PLPNPSLPIA DQKNMVFMGT SVTSGKGTCV IVTTGMHTEL GKIAGLIQEA GKEETPLQRK 240
  241 LEVFGKKLVY LCLGIVTIVF LLELCRKDPL LEAFLISVSL AVAAIPEGLP AIVTIALALG 300
  301 VQRMVKRHVL IRKLPSVETL GCATVICSDK TGTLTQNEMT VRKIFANGKT IDVSGTGYMP 360
  361 DGNFLVNGES LLGIDQKALE KTLEIGVLCN NTHLKKEDAT WKVIGDPTEG AILSAAGKTG 420
  421 IWKEMLDKQF PLISEIPFDS ERKKMSTIRG TSPALQVCEK GAPDVILQDC TKIYHDGTTR 480
  481 DLTENDIQVI LEENNNLAGS ALRVLGVAYK PLDREITNPV PDTVEREMIF VGLLAMIDPP 540
  541 RPEVKEAVAV CHTAGIKTVM ITGDHKNTAR AIGEELGFLS SNSSKAIDGI ELDALSDDDL 600
  601 AKEVSKIAVY ARVTAEHKLR IVKAWKKQGD VVAMTGDGVN DAPAVKEANI GVAMGITGTD 660
  661 VTKEASDMVI TDDNFASIEA AIEEGRGIYD NIKKSIHYLL SCNTGEILTM LLASIFNLPI 720
  721 PLFPIQILWI NIATDGLPAL ALGVDTVDPD IMKRLARRST EQIIDKRLGI LILFQGFLIA 780
  781 MSTLLAYTYV LYYGTRAIPD YLYHWFCNEA APHLLRGDIE LARTIAFCVM VVSQLFHSFN 840
  841 CRNARRSLFE IGVFTNNKLL LAAGISLAIQ VAIVYTPFFE DIFRVRPLEL IDWITVFGFS 900
  901 SLTFIIMEVV KYGKREKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle