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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91201482
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMNIRTRNS IKWKLLITML GLIIGLLTIL TLVQIYSQKE ILTGELEQRI ELIKDNLRKQ  60
   61 GKTLSDNLAF QVEDALASFN LLDIFSKTNK AVRENTDLKY IILADLKGFA LIHTLKPELN 120
  121 DSILSGGDDT FAIAQKNATI NEFEKDGTPY MEFIVPIHVS ADQWGVLRLG YSLENLYQIL 180
  181 SASRHKIKEQ IFNIIIRSGL TTIVFIAIGS CLVLFLSSRL AQPLIKLAQM AQELAKGNFS 240
  241 VSENSILNSK DEIGVLAQTF SIMSKELKNY YEILEDYSHS LAMRVEERTA ELLKSNNLLK 300
  301 QEIDERHRIE AELEKAREAA VAANNAKSEF LASMSHEIRT PMNAIIGMSD LLWETTLTPK 360
  361 QSEYVKVFRN AGENLLQIIN DILDLSKVEA GQITIEHIEF NLREQIEKTC EVMAFRAHEK 420
  421 GLELNCHLAE DIPTSFIGDP VRLHQILTNL IGNAIKFTRT GEILLTGKRN KLPGKKGMLL 480
  481 FLVSDTGIGL PEEKQSIIFN IFSQVDSSTT RQYGGTGLGL AICKRLVELM DGEIWVESTP 540
  541 GKGSTFYFTV TFDVHPKPQE QKEIPLSGAE KPYVLIIDDN ATNRMILRDM LHGWDIPVAE 600
  601 AEGGENGINE LKRARNAGTP YNLLLLDCRM PGMDGFQIAR SVKNDPELAG LIIMMFTSDN 660
  661 KSGDVARAKE LGITTYLVKP IKRHDLLTSI NAVIDPQKTI PFTGPASRTV IQIPESVPTR 720
  721 QLLLVEDYYH NRVLIQAYLN KTNFKVDVVE NGLECLEKFK NEKYDLVLMD IQMPVMDGYT 780
  781 ATREIRRYEM ELGLKATPVI ALTAHAFKGD EQKSIDAGCN CHLIKPIKKQ TLIDAIHKYV 840
  841 PLHANYTPAT DGEKAAFSAG KVTNEITVEN KLFVSINPIF KNVTPEFIED VRSDIMTMTA 900
  901 ALQNTDYKTI ETLAHRLKGA SGGYGFDELT DMGKFLEISA KNRHVAEMQK WIHAMSQYIE 960
  961 QVEIVYE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle