YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91200837
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWEGNIEGR VRLIDQTLLP AEIKYIYCED LKSIWRAIKT LMVRGAPAIG IAAVTGVLLG  60
   61 IKDIRTDDTE AFFKELKNVT NYLGSSRPTA VNLFWGLSRM ERVAWENRDK PVHTIKEILL 120
  121 REAINVQNED KSICRQIGEN GAKFIKDGDG VLTHCNAGGL ATADYGTALA VMFKAKENGK 180
  181 KFKVYADETR PLLQGARLTT WELMHAGIDV TLICDNMAAH VMKLGKIQCV IVGADRIAAN 240
  241 GDAANKIGTY GVSILAKEHG IPFYVAAPVS TFDLNITSGD EIPIEERSSE EVTCGFGKRT 300
  301 APEGVKVFNP AFDVTPAKNI TAIITEKGVI EKPSTENVQK ILGK

Type	Start	End	Confidence
Cytoplasmic	1	40	0.61
Transmembrane Helix	41	61	0.60
Non-Cytoplasmic	62	344	0.97