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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91199950
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTANHSFETE KLVDPICGMA VAPETAAGKY DFQGETYYFC STGCLNKFRQ NPQNFLEGKK  60
   61 NEKQAEESAS AEYTCPMHPE IVQIGPGTCP KCGMALEPKI FSLDDAPDPE YVDMTRRFWI 120
  121 CAVFTIPVFI LAMGEMLPNF HSFISPEISI WIQFVLAMPV VLWGGFPFFK RGWTSVKNAS 180
  181 PNMFTLIALG TGAAYLYSLF ALFFPHFFPV SMQDEHTGLI GVYFEAAAVI TTLVLLGQVL 240
  241 ELRARSQTSS AIKGLLELAP ETAIVVSDGG MEEEIALQDV PIGATLRVRA NEKIPTDGVI 300
  301 LQGETAIDES LVTGESIPVE KQVGDKVIGG TINGGRPLLM RAEKVGSDTL LAQIVRMVGE 360
  361 AQRSRAPIQR LADVVSAYFV PAVILVAIAA FIVWLILGSF TYALVAAVSV LIIACPCALG 420
  421 LATPMSIMVG TGRGAQAGVL VKKAEALEVL EKVNVIVVDK TGTLTEGKPR LQKTISLSGV 480
  481 DEKDVLRFAA SLEKSSEHSL AAAIIKGAEE ENVRLAAVDD FESFTGKGIF GTIEGKKVLV 540
  541 GNTKLMQDNN VDFPADGKAD ELRLEGQTVM FVAVDGEPAG FVGVADTIKE SAREAINELH 600
  601 RQKIKVVMMT GDNAKTAGAV ARKLNIDQVF ADILPDQKAD KVKQLQAQGK IVAMAGDGVN 660
  661 DAPALAQADV GIAMGTGTDV AMQSADITLL KGDLRGILRA KTLSRATMQN IRQNLFLAFV 720
  721 YNVLGIPIAA GVLYPFTGWL LSPMIAAAAM TFSSISVIMN ALRLRNLQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle