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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110742309
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD  60
   61 TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE KSGEENSGEK TESAEERKEF 120
  121 DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE 180
  181 KKSEENAGET EESTEKSKDV FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW 240
  241 KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK 300
  301 SREKIWYTNT PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA 360
  361 WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA QVQFALERGI PAMSNVMGTK 420
  421 RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW 480
  481 KAMSKLTKAM CWELMTIKKD ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW 540
  541 NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK 600
  601 TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER 660
  661 GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG VMAEVDRILR PQGTFIVRDD 720
  721 METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle