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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110742142
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESTSVVAP PPEIPNLNPS MFSESDLFSI PPLDPLFLSD SDPISMDAPI SDLDFLLDDE  60
   61 NGDFADFDFS FDNSDDFFDF DLSEPAVVIP EEIGNNRSNL DSSENRSGDG GLEGRSESVH 120
  121 SQVSSQGSKT FVSDTVDASS SPESSNHQKS SVSKRKKENG DSSGELRSCK YQKSDDKSVA 180
  181 TNNEGDDDDD KRKLIRQIRN RESAQLSRLR KKQQTEELER KVKSMNATIA ELNGKIAYVM 240
  241 AENVALRQQM AVASGAPPMN PYMAAPPLPY QWMPYPPYPV RGYGSQTPLV PIPKLNPKPV 300
  301 SSCRPKKAES KKNEGKSKLK KIASISFIGI LFFVFLFGTL VPFMNVNFGG ERGSFGGLSK 360
  361 YDGHRYYDEH KGRVLMVGDG SDVRRNSGIS EGNIHSSRIS HGERDSCGGV DYNAHPKVEG 420
  421 RPSSLSNASD PLFASLYVPR NDGLVKIDGN LIIHSVLASE KARGLGKKNI TETVKTKEPD 480
  481 LTIPGALSSA LAVPGVRGNA AMLPHSTALS SEGKRLHQWF HEGGSGPLMD YSMCTEVFQF 540
  541 DIAPGAIVPS SVSSISAEHL QNVTTHGKRM KNRRILEGLP VSLVASELNI TGTQPNKDAQ 600
  601 NKTFNGNTNK PTSSSSMVVS VLLDPREVVD SETDRVVPPN PKSLSRIFVV VLLDSVKYVT 660
  661 YSCVLPRSGL HLVAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle