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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110741802
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFFFYLLLSS SSDLVFADRR VLHEPFFPID SPPPSPPSPT PLPKLPFSST TPPSSSDPNA  60
   61 SPFFPLYPSS PPPPSPASFA SFPANISSLI VPHATKSPPN SKKLLIVAIS AVSSAALDAL 120
  121 LIALLYWRRS KRNQDLNFSD DSKTYTTDSS RRVYPPPPAT APPTRRNAEA RSKQRTTTSS 180
  181 TNNNSSEFLY LGTMVNQRGI DEQSLSNNGS SSRKLESPDL QPLPPLMKRS FRLNPDVGSI 240
  241 GEEDEEDEFY SPRGSQSGRE PLNRVGLPGQ NPRSVNNDTI SCSSSSSGSP GRSTFISISP 300
  301 SMSPKRSEPK PPVISTPEPA ELTDYRFVRS PSLSLASLSS GLKNSDEVGL NQIFRSPTVT 360
  361 SLTTSPENNK KENSPLSSTS TSPERRPNDT PEAYLRSPSH SSASTSPYRC FQKSPEVLPA 420
  421 FMSNLRQGLQ SQLLSSPSNS HGGQGFLKQL DALRSRSPSS SSSSVCSSPE KASHKSPVTS 480
  481 PKLSSRNSQS LSSSPDRDFS HSLDVSPRIS NISPQILQSR VPPPPPPPPP LPLWGRRSQV 540
  541 TTKADTISRP PSLTPPSHPF VIPSENLPVT SSPMETPETV CASEAAEETP KPKLKALHWD 600
  601 KVRASSDREM VWDHLRSSSF KLDEEMIETL FVAKSLNNKP NQSQTTPRCV LPSPNQENRV 660
  661 LDPKKAQNIA ILLRALNVTI EEVCEALLEG NADTLGTELL ESLLKMAPTK EEERKLKAYN 720
  721 DDSPVKLGHA EKFLKAMLDI PFAFKRVDAM LYVANFESEV EYLKKSFETL EAACEELRNS 780
  781 RMFLKLLEAV LKTGNRMNVG TNRGDAHAFK LDTLLKLVDV KGADGKTTLL HFVVQEIIRA 840
  841 EGTRLSGNNT QTDDIKCRKL GLQVVSSLCS ELSNVKKAAA MDSEVLSSYV SKLSQGIAKI 900
  901 NEAIQVQSTI TEESNSQRFS ESMKTFLKRA EEEIIRVQAQ ESVALSLVKE ITEYFHGNSA 960
  961 KEEAHPFRIF LVVRDFLGVV DRVCKEVGMI NERTMVSSAH KFPVPVNPMM PQPLPGLVGR1020
 1021 RQSSSSSSSS STSSSDEDEH NSISLVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle