YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110739481
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSLGLYAPNA LPSLSLKPRS VKSPFCITSH TKPNDTLLHN VNKMRAKACD ILGAKKTILA  60
   61 AQLGAVLATI DHPALAITGV NNQQELSSVV LDIGIISVWY FLVMPPIIMN WLRVRWYRRK 120
  121 FFEMYLQFMF VFMFFPGLLL WAPFLNFRKF PRDPNMKNPW DKPTDPDSIK NVYLKYPYAT 180
  181 PEDYDLD

Type	Start	End	Confidence
Cytoplasmic	1	52	0.90
Transmembrane Helix	53	75	0.73
Non-Cytoplasmic	76	88	0.81
Transmembrane Helix	89	112	0.83
Cytoplasmic	113	123	0.83
Transmembrane Helix	124	145	0.92
Non-Cytoplasmic	146	187	0.96