YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110739384
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLTKGKVGN TKKHFEEKEE DKRRSTRIIC LKSNRIDSVF FFFFTYLSLS LSWSIRYSIL  60
   61 LVGAGESEMT WSVFRSINTP TLDLSTALRS TRTPLVAAGV GCATFAGVSL FRMSSRSPPF 120
  121 ASLSVSASSV KKEVVSTEKA PAALGPYSQA IKANNLVFLS GVLGLIPETG KFVSESVEDQ 180
  181 TEQVLKNMGE ILKASGADYS SVVKTTIMLA DLADFKTVNE IYAKYFPAPS PARSTYQVAA 240
  241 LPLNAKIEIE CIATL

Type	Start	End	Confidence
Cytoplasmic	1	38	0.88
Transmembrane Helix	39	60	0.80
Non-Cytoplasmic	61	92	0.78
Transmembrane Helix	93	113	0.88
Cytoplasmic	114	255	0.78