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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ETR2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.50
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV  60
   61 AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL HGWTYSAHPF RLMMAFTVFK 120
  121 MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ 180
  181 EIRKSLDRHT ILYTTLVELS KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME 240
  241 DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL 300
  301 VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD 360
  361 ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD EQKMIVDTMV KTGNVMSNLV 420
  421 GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR 480
  481 VFQVILHIVG SLVKPRKRQE GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF 540
  541 EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQL IHGYISVVPG 600
  601 SDGSPETMSL LLRFRRRPSI SVHGSSESPA PDHHAHPHSN SLLRGLQVLL VDTNDSNRAV 660
  661 TRKLLEKLGC DVTAVSSGFD CLTAIAPGSS SPSTSFQVVV LDLQMAEMDG YEVAMRIRSR 720
  721 SWPLIVATTV SLDEEMWDKC AQIGINGVVR KPVVLRAMES ELRRVLLQAD QLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle