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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110737331
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFSLSLSLCS SLSFELPFFL IAIFIFNLQL SQIDPSRITI MSDHGEKTCP LCAEEMDLTD  60
   61 QQLKPCKCGY QICVWCWHHI VDMAEKDQIE GRCPACRTPY DKEKIVGMTV NCDSLASEGN 120
  121 MERKKIQKSK SKSSEGRKQQ LTSVRVIQRN LVYIVGLPLN LADEDLLQHK EYFGQYGKVL 180
  181 KVSMSRTASG VIQQFPNNTC SVYITYGKEE EAVRCIQAVH GFILDGKPLK ACFGTTKYCH 240
  241 AWLRNVACVN PDCLYLHEVG SQDDSFTKDE IISAYTRVQQ ITGATNILQH HSGNMLPPPL 300
  301 DAYCSDSSSA KPIIKVPSTN ATSVPRYSPP SGSGSSSRST ALPAAASWGT HQSLATSVTS 360
  361 NGSSDIQRST SVNGTLPFSA VVANAAHGPV SSNDILKRPS RKEESQIVMD KVKPSVLKPL 420
  421 QHNVVVSGSE RITAPDRDPT SNRLSSSVDS AYGGRDIDQP SAYSGRDIDK PSSTVSSFDA 480
  481 ANEAVEDVPT VSNLLDGVAC MRITMNCRDE RPDITMAIGS QSDQGSIRQP GSEVSKLPDL 540
  541 EQCRIDSSIN TDKKAISLED RIPRTRPGWD WISDLQSQMQ GSSKLQVEDI STLDSQRPHP 600
  601 EEDIIHSRLL SNLSSSSLDT NHMASRSSLP CEVRGSDRLH LPNGFGEKSM SSVEHSLFAN 660
  661 EGRNKVNNAE DAILSNILSL DFDPWDESLT SPHNLAELLG EVDQRSSTLK PSNFLKQHNN 720
  721 QSRFSFARYE ESSNQAYDSE NYSIYGQLSR DKPIQESAMS RDIYRNNLGS VNGFASNFAG 780
  781 GLDNFAASPL FSSHKNPVSR PQVSAPPGFS APNRLPPPGF SSHERVGLSS DTTLGNRFLD 840
  841 STSLRNAYQV PPPVGNSNGA SDIDFVDPAI LAVGRGMVNA DLDMRSGFSS QLNSFENETG 900
  901 LHMLRQQSLS SAQQVNGFHH DLRNLSPSLN DPYGFSSRLM DQTQGSSLSP FSQLPRQQPS 960
  961 ANSILSNGHH WDKWNEGQSV NNIGMAELLR NERLGFNGSL YNNGYEEPKF RIPSPGDVYN1020
 1021 RTYGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle