YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110736000
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLEDLKIV AEQWSKQGLE FVQKIPPPQL YTAIGVLLLA TIWLLSIRLF RRTKSNTVLL  60
   61 SGLSGSGKTV LFYQLRDGSS HQGAVTSMEP NEGTFVLHNE NNTKKGKVKP IHLIDVPGHS 120
  121 RLISKLEEYL PRAAAVVFVV DALEFLPNIR AASEYLYDIL TNASVIKNKT PVLLCCNKTD 180
  181 KVTAHTKEFI RKQMEKEIDK LRVSRSAIST ADIANDFTLG IEGEVFSFSH CHNKVTVAEA 240
  241 SGLTGETDQV QEFIREHVKP

Type	Start	End	Confidence
Non-Cytoplasmic	1	28	0.70
Transmembrane Helix	29	47	0.91
Cytoplasmic	48	260	0.57