YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90399198, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGARVNLKG WQQAAVAFGS AFGALLDPRR ADLIAVLGET TGKPAFQRVL QRMRNSAEGR  60
   61 DVLLERPRVI STQVSHAWDM PQNTFGAAYA QFMGSRNFSP DDRPPVRFMD TDELAYVATR 120
  121 AREVHDFWHV LFGLPTNLIG ETALKVIEFE QMFLPMCMLS VVGGSARFNE KQRTLFFQHY 180
  181 FPWASKAGLK CTDLMSVYYE KHFHEDLDEV RRNWGIIPCP DPKRSSV

Type	Start	End	Confidence
Signal Peptide	1	31	0.69
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	227	0.97