YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE40178
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEDPIYSQ NESLLLGSSN KSQASNSSKT IAKRATVFIG ILFITTPIVF GLSEVVGKNN  60
   61 EESSPKNQTS ETTTAENNTT LVHRTSFKTQ EKMVQLIPKS GQDYIKFTYD IIKDTYSYDN 120
  121 VDGTPISCTY YPLNGYVESE KEIESLNMNF FTSQRC

Type	Start	End	Confidence
Cytoplasmic	1	34	0.78
Transmembrane Helix	35	53	0.78
Non-Cytoplasmic	54	156	0.96