YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89885393
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFYRLSFQT YLLVAGAFCS ICTLAVIFNC GWEDNNNIAL ASTAHLSETF LFVSVLSSPN  60
   61 ETERRQNVRE TWFRLSAKGP SVFIAKFVVG TMGLDSEERK ILEEENAKFG DLSFLKRHEE 120
  121 AYDKLAKKTL FSFQNAYDNF KFKFFLKTDA DSFVRITPLI MNLKTVQHPM LYWGFLDGRA 180
  181 KPFRKGKWKE PEWNLCDRYL PYQLGGGYIL SYELVRFLAT NAPLFRIYKN EDVSVGAWLA 240
  241 GLDVKYVHDP RFDTEWTSRG CSNEYLITHK HTMQEMTQMY ENLKTTGKLC AKEFHFCRRR 300
  301 LSYVYDFSKP PSECCTRVNG TNIP

Type	Start	End	Confidence
Signal Peptide	1	25	0.48
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	324	0.79