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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PO2F1_XENTR
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLHSSSKIP NHAWLSDARM NNPSETSKSS ESGDGNTGTQ TNGLDFQKQA VPIGAITSAQ  60
   61 AQALLGHLHQ VQLAGTSLQA AAQSLNVQTK FKEEPGEPTQ AVQPSQQPSL QAAIPQTQLM 120
  121 VAGGPITGLT LTPAQQQLLL QQAQAQLLAA AVQHSASQQH SAAGATISAS AATPMTQIPL 180
  181 SQPIQIAQDL QQLQQLQQQN LNLQQFVLVH PTTNLPPAQF IISQTPQGQQ GLLQAQNLLT 240
  241 QLPQQSQANL LQSQPSITLT SQPATPTRTI AATPVQQLPQ SQTTPKRIDT PSLEEPSDLE 300
  301 ELEQFAKTFK QRRIKLGFTQ GDVGLAMGKL YGNDFSQTTI SRFEALNLSF KNMCKLKPLL 360
  361 EKWLNDAENI TSDSSLSNQS VLNSPGHGME GLNRRRKKRT SIETNIRVAL EKSFLENQKP 420
  421 TSEEITMIAD QLNMEKEVIR VWFCNRRQKE KRINPPSSGG SSSSPIKSLF SSANPLVATT 480
  481 PSLVTSSTAT TLTVNPVLPL TSAAAITSFP VPGTTGTSSA NTATVISTAP PVSSVLTSPS 540
  541 LSPSPSATAA TSEASTASGT STTHTTSTPL TSPLSTGQVM VTASGIHTAA TALQGAAQLP 600
  601 TSASLAAMAA AAGLNPGLMA PSQFAAGGAL FSLNPGALGS ALSPALMSNS TLATIQALAS 660
  661 SGSLPITSLD ATGNLVFANA GGTPNIVTAP LFLNPQNLSL LTSNPVSLVS AASTGVTGPI 720
  721 TSLHATTSSV DSVQNTLFTV ASASGAASTT TSASKAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle