YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89272022
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WEGVPALVRI VLKKIQLLRY IKHFVPKMSR FLAVLRSWLM MVSIIAAGNT FQSFRDHSFL  60
   61 SDKLYTASPN LVNGLQARTF GVWTLLSSVI RCACAVDIRN KTLYHLTLWT FILALGHFLA 120
  121 EVFVYQTAAI TIGIMAPLMV ASFSILGMLI GFQYLEVQQE SSVRCNKKKN

Type	Start	End	Confidence
Cytoplasmic	1	31	0.97
Transmembrane Helix	32	51	0.92
Non-Cytoplasmic	52	74	0.90
Transmembrane Helix	75	95	0.89
Cytoplasmic	96	102	0.87
Transmembrane Helix	103	124	0.87
Non-Cytoplasmic	125	129	0.70
Transmembrane Helix	130	152	0.90
Cytoplasmic	153	170	0.89