YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89271328
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLSASAQK LLSFFPFLLV LFDLQYEGVE CGINADVDKH LEMGKKLLAA GQLADALSHF  60
   61 HSAIDGDPDN YVAYYRRATV YLAMGKSKAA IPDLSKVIEL KPDFTSARVQ RGHLLLKQGK 120
  121 LDEAEEDFKK VLKSNPNEQE EKEANAQLLK SSEIQSMRSQ GIAAYKEGDY STAETYLNFV 180
  181 LETCIWDAEI RELRAECYIS QGEPGKAISD LKAASKLKSD NTNAFYKVSK IYYQLGDHEM 240
  241 SLSEIRECLK LDPDHKECFS HYKQVKKLNK QIQAAEELIH EGRYEDALPK YEGILKTEPN 300
  301 VPYYSALVQE RSCHCYSKSQ QSTEAIRVCT EFLQQEPNNV NALKDRAEAY ILEEMYEEAI 360
  361 RDYETAQQNN ENDKQIREGL DKAQKLLKQS QKRDYYKILG VKRNAKKQEI IKAYRKLAQQ 420
  421 WHPDNFQDEE EKKKAEKKFI DIASAKEVLT DPEKRSRFDA GEDPLDPESQ QGAGGPHFHR 480
  481 GWNQWQGFNP FGSGGPFSFK FNFN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle