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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94263588, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGRLFFGKR LALFLFTAIL ACTMIKFDDS QAGELAPRLH KEELANGLTV ITRQTPATGV  60
   61 ATVQIWLEAG SVYEEPHEAG ITHFIEHLIF KGTEKRGPGE IAGAIEALGG RINAYTSFEH 120
  121 TVYHATLDAR HWEQALEVLA DAVLNSVFDP DEIEREKPVI FEEIRMRQDR PELHLFQELL 180
  181 SHAYQQHPYR LPIIGSQESV AAIERDDILA YVKEHYHPGN MTVVVVGDVN PAEVSAQTRK 240
  241 LFGELPAKEE TPPRELPVEP PPTDFRFFLE EQAINQTHLT LALPIPAFKH PDTPVLSVLS 300
  301 QILGQGEASR LNERLRHEKG LVYRLGTSLL SLRDPGLLRI SATLDAERAP EVLEEILAEL 360
  361 FALRHFPVDD EELERARRNL EADFVFNLEQ AEGMARVLGT FELLTGDPRE QEYLERIRAV 420
  421 EAADIKRVAN QYFRKEHLTV GLLTPLAASL ELDRRQLTEI MVRAAERARK QVPDRRASDL 480
  481 PPHTHRFELD NGLTLLVRER PDVPTVAMRA VFPGGLRGET PATNGAFAFL AELLPRGAGE 540
  541 LGARQMARTI ADLAGELEGF SGRNTFGLKG DFLARFFDQG LLLLRDVIKK PAFDAEEAEK 600
  601 IRGELLANLR RQEDALPSVA IRELNRLLFR GHPYALNTMG SATSLRELEL ATLKEIYQDH 660
  661 ARPDKMVLSV VGDIDAEGVR RQVEELFGNW QAPPEVDTQV VETLLPPEPP LKPEMIELTR 720
  721 EREQVHIVFG FLGTTLTDPD RYPLEILDQV LSGQSGRLFT ELRDRQGLAY SLSSFALLGT 780
  781 DTGSFGVYIG TSPEQREQAI KEIWSQLYRL RNEPISADEL KRARNVLVGN YHLGLQGNGA 840
  841 QAMEMALNET YGLGLDFGQR YPAALEAVSA AEVREAARRY LQPERYVMVT VGGSEAPPTD 900
  901 EPADPVVPPE QPPAKAEGQA NDREGSHDGE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle