YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|93452654, gi|...
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVNLANALP EITDHPIHVV LARREGEFLE ELRPEVHIVD LNTRRASRSV LALARYMRRE  60
   61 RPLAVFSTLN YANVICLLAA ILAGKPCPVI VREANVVRRQ SGGFKDRVIL GLMRLLYPRA 120
  121 DRVVAICRDV EQSMLDAGVN IRNKIVRIGN PVRLDAYKDE GATPEWTPGP QTRFICAIGR 180
  181 LTEQKGFDIL LEAFARLKHK DLHLAILGEG PLRKELELQA EELGIDGRVH LPGFVPNPRE 240
  241 VTQRSELFVL SSRWEGFVNV LLEALAVGAP VVSTDCPGAA REILENGTHG HLVAPDDPEA 300
  301 LARGIAEALA CPVGTPESRM ARAADFSAEK IAGKYLELVS GQLVCHIITG LNNGGAEGAL 360
  361 YRLCRADRQN RHLVVSMMDG GHYGPLLQDA GIEVVCLNMR QGRPSLRGIY QLWRLLRQTR 420
  421 PDVVQGWMYH ADLVGGLVAR AAGVRRVFWG IRHSTHEVGK TRKSTVLVTR LCAWLSRWVP 480
  481 AGVVCCALRA SEVHRKLGYF AEKLVVAPNG YDLHCFQPDQ QAGMGMRKNW GVKENVFLLG 540
  541 MVARFHAQKD HESLFRALAR LKKGGLFFRC ALVGPGVDND NSQLLAWREQ YDLAEEILLL 600
  601 GAGSDIPAVM NALDLHVLSS SFGEAFPNVV AEAMACGTPC VATDVGDASL IVGETGWIVP 660
  661 PGDADSLAAT IAAAASEFNN PSSPAWQQRR LSARQRVVEN FSMEKMVANF HAVWRQGGVV 720
  721 V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle