YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94268153, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEPGRIIIF LRGCLTLAAI PLLTITVCLA AAVLAATRGY ADGQLRFLAR WWGRTICRLA  60
   61 GVRPRINGLA NLDGERPYIF VANHQSQFDI FVLQGYFEYD FRWLAKKELF QIPLLGWGMR 120
  121 RSGYIPVDRG HGRQALASLG VAAQRIAAGT SVVIFPEGTR SPDGRLLPFK AGGMVLAIKA 180
  181 GVEVVPMAIA GTREILPKGR LLPRPGPVCI EIGRPIASSA YNLKQKQELA ALLEKEVRQL 240
  241 LAKAESAPQT ST

Type	Start	End	Confidence
Signal Peptide	1	35	0.95
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	252	0.99