YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92432232, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPALSSLKGR SSTGRAAVSK TAGCRFKSCR PCQLNTGQAW TLDSDDEYEE STRTRDERHA  60
   61 VSDERDSAGS AGTGDDAGTD GVDDTRGQTA VVTRPLRPTG KRTRRAAVET DAESDATELT 120
  121 ESSGTENGSG TKKKTAKKEP GRYPNPFLFV VNYIKQVVAE LRKVIWPNRK QMVSYTSVVL 180
  181 VFLAFMVALI AGFDYGMARL VGLVFGE

Type	Start	End	Confidence
Cytoplasmic	1	171	0.97
Transmembrane Helix	172	193	0.93
Non-Cytoplasmic	194	207	0.86