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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126235443, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTLAYIPS PPQGVWELGP FPLRAYALCI IAGIIVALVL GDRRWEARGG ERGVIYDIAL  60
   61 WAVPFGLIGG RLYHVITDWQ TYFGPDGAGL IAAFRIWEGG LGIWGAVALG GIGAWIACRR 120
  121 RGIPLPAFGD AIAPGIILAQ AIGRLGNYFN QELYGRATTV PWGLEIYERV DASGARNDLI 180
  181 GVSTGRVIEI VHPTFLYELV WNLLVFAVLI WADRRFNLGH GRLFALYVAG YCLGRFWIEL 240
  241 LRSDMATELA GIRVNSFTSM FVFIGAVVYL MAAPRGREDP ATLRSDVDEE VEAAAVSPND 300
  301 FEADAVEPGG SDEDDAATTA LLKEAAAATG VGVAAKVAGE EDAKDEEVQS DTAEPVAEAE 360
  361 ALAEDVESAP SEDIAEAVAF AEAGEAADRE PMTTAGVVEG EDAVAAEESA EEAHEAAVEG 420
  421 AEEAEVVAEE VAAEDRAQET PAEASSVKPS RFLGRLFARA SHSVKPEPAE AGKAGQAADH 480
  481 ETLTTARAAD GGPDEGMPEP VAEAEALAED VESAPSEDIA EALAFAEAGE AADEEPPVTV 540
  541 GAVEGEDAVA AEESAAEAHE AAVERAAEAE ALADEVAVAD AGEPESEPEP EPEPEPEPEP 600
  601 EPEPEPVAEV EAGEAGDREP LTTVGVVEGE DAVAAEESAE EAHEAAVEGA AEAEAVADEV 660
  661 AGADAGEPEP EPEPVAEVEA GEAGDREPLT TVGVVEGEDA VAAEEAHEGA AEAEAVANGV 720
  721 AADDAAALEG EDGAAEEPLD EDLEAAVERA DEAEAVAEEI AVADSEGQFA DDEPVEDRDA 780
  781 EAVAGEVGAA EAEALEDSAV EQETAPDEIA EPVVDDEELA ASAQDAPGDD VADIDEGGET 840
  841 DASAYQIITT PDAVPTRRRW FRRRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle