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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111617741, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFFPCAGQA EPRPAVPARA FQGTSVPARR QAPTLLRLRR GSGDFLPLLG HLFHQLLAAL  60
   61 LGHGDHFRAV LVVGVHAVGQ GDVVVAEAVR QRLGLRGGHA HHLQHGARGL QAGLEHLALD 120
  121 PRHAQVAQRV PVRHVARAGH DLQLRKMLAR DLHDLERLLG VVHRHHQHAR LRRARDAQQV 180
  181 QPRGVAVEHA VAEGVRHLQH VHAVVQHRGR HALRQHHARH DLPVPAEARD DHRRFLRLGD 240
  241 LLHVRRWLGA QARMAPQQHA VERGEQQRAE QHRQRHRADE QRGRLGRDGP RARGRLEHHE 300
  301 RELAPLRQQQ REHRPLLVGH ARGARERVDH HRLHGKEAEQ QRQHGPGRAH QHAEVDGHAH 360
  361 GHEEQAQQQA LERLQVGFQL AAVFALGQQH AGEEGAQRHR QAHGQHQHGR GDHQQQRRGR 420
  421 EDLRRAAARD PAQQRAQQQA PAQHDPAHHA DDLRGLQRQA AGRVGLRRAA RALRAGGQQR 480
  481 QQREDGDGRH VLEEQDRERL LPAVRAHQVA LGQHLQRDRG GRQRQPQRPD QRHAPRQPAG 540
  541 PGHRPQQGRA AQHLRAAEPE DRPPQAPEAA RLQLQPHEEQ HQHHAELGEM QDVLHIAHQA 600
  601 QAPRADGNAG REIADDGAEP ECARDGHCQY GGAEVEESVG EPGGCVGHGR GVGSGRDEEG 660
  661 EAEEGGAGAL CPLTCSTVSA AMPARHPLSI FSCCLPMDFH TWLAFAAAAC LIALSPGSGA 720
  721 VLSMSHGLAY GVRRTGATIL GLQLGLLLVL VIAGAGVGSL LLASETAFSA VKVMGACYLI 780
  781 YLGFTQWRAG GASVFGDEGA APAASWRRRC AAGFLTNATN PKGIIFMVAV LPQFLTESRP 840
  841 LWTQLLALGA TMVVVDLTVM HGYAASASAL RRLLRSPRAV RNQNRVFGGL LMAVGAGLFF 900
  901 VRRGGQHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle