YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120610024, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSSATLTG SIVALVTPMH EDGSVDYPTL RKLIDWHVAE GTDCIGVVGT TGESPTVNVE  60
   61 EHCEIIRVAV EQAARRVPIM AGCGANSTAE AIELARFAKK VGADSQLQVV PYYNKPTQEG 120
  121 QYQHFRSIAE AVGDLPTVLY NVPGRSVADM QHDTVLRLAQ VPGIIGIKEA TGNIERAQWL 180
  181 IRDVPEGFAV YSGDDPTAVA LMLCGGQGNI SVTANVAPRL MHELCVAALA GDVRRAMEIQ 240
  241 FRLMPVHKHL FVEANPIPVK WAMQRMGLCG GTMRLPMTPL SPGSEPVVEA ALRSAGLL

Type	Start	End	Confidence
Signal Peptide	1	21	0.67
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	298	0.99