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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AGRN_CHICK, AGRI...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGSGAAATL ALGLALGLAL GGWANCPERE LQRREEEANV VLTGTVEEIM NVDPVHHTYS  60
   61 CKVRVWRYLK GKDIVTHEIL LDGGNKVVIG GFGDPLICDN QVSTGDTRIF FVNPAPQYMW 120
  121 PAHRNELMLN SSLMRITLRN LEEVEHCVEE HRKLLADKPN SYFTQTPPTP RDACRGMLCG 180
  181 FGAVCERSPT DPSQASCVCK KTACPVVVAP VCGSDYSTYS NECELEKAQC NQQRRIKVIS 240
  241 KGPCGSKDPC AEVTCSFGST CVRSADGQTA GCVCPASCSG VAESIVCGSD GKDYRSECDL 300
  301 NKHACDKQEN VFKKFDGACD PCKGILNDMN RVCRVNPRTR RVELLSRPEN CPSKREPVCG 360
  361 DDGVTYASEC VMGRTGAIRG LEIQKVRSGQ CQHQDKCKDE CKFNAVCLKR WHARCSCDRI 420
  421 TCDGTYRPVC ARDSRTYSND CERQKAECHQ KAAIPVKHSG PCDLGTPSPC LSVECTFGAT 480
  481 CVVKNREPVC ECQQVCQGRY DPVCGSDNRT YGNPCELNAM ACVLKREIRV KHKGPCDRCG 540
  541 KCQFGAICEA ETGRCVCPTE CVPSSQPVCG TDGNTYGSEC ELHVRACTQQ KNILVAAQGD 600
  601 CKSCGTTVCS FGSTCVGGQC VCPRCEQQPL AQVCGTDGLT YDNRCELRAA SCQQQKSIEV 660
  661 AKMGPCEDEC GSGGSGSGDG SECEQDRCRH YGGWWDEDAE DDRCVCDFTC LAVPRSPVCG 720
  721 SDDVTYANEC ELKKTRCEKR QNLYVTSQGA CRALTTTPPP LPVVHCSQTI YGCCPDNMTL 780
  781 ALGVGAAGCP STCQCNPYGS YGGTCDPATG QCSCKPGVGG LKCDRCEPGF WNFRGIVTDS 840
  841 KSGCTPCNCD PVGSVRDDCE QMTGLCSCKT GITGMKCNQC PNGSKMGMAG CEKDPSAPKS 900
  901 CEEMSCEFGA TCVEVNGFAH CECPSPLCSE ANMTKVCGSD GVTYGDQCQL KTIACRQGQL 960
  961 ITVKHVGQCH ESITHTSHTM PPTPLPTLPL DKLIVPPPLQ LTTQAPEPTE LATTSLLMEA1020
 1021 SPTTRSHPTT RRVTTTRPVT TPWMTHGVLK TTVRPLSTSP VVLATTQPPY AESGSAEGSG1080
 1081 DQEMSISGDQ ESSGAGSAGE EEVEESQVTP TPAIERATCY NTPLGCCSDG KTAAADAEGS1140
 1141 NCPATKVFQG VLILEEVEGQ ELFYTPEMAD PKSELFGETA RSIESALDEL FRNSDVKNDF1200
 1201 KSIRVRDLGQ SSAVRVIVES HFDPATSYTA ADVQAASLKQ IRASKKRTIL VKKPQQEHVK1260
 1261 FMDFDWIPRI FTTTITTTTA TTMAPATTRR HTTASAATTA HILRQDTVGH PSAKLAAPAS1320
 1321 TRRPTSTLPT TARRKPTRQP PSTTKKPSRP CDSHPCLHGG TCEDDGREFT CRCPAGKGGA1380
 1381 VCEKPIRYFI PSFGGKSYLA FKMMKAYHTV RIAMEFRATE LSGLLLYNGQ NRGKDFISLA1440
 1441 LVGGFVELRF NTGSGTGVIT SKVRVEPGKW HQLVVNRNRR SGMLAVDGEH VSGESPTGTD1500
 1501 GLNLDTDLFV GGAPEDQMAV VAERTAATVG LKGSIRLLDV NNQMYDLREK GSDVLYGSGV1560
 1561 GECGNDPCHP NPCHHGASCH VKEAEMFHCE CLHSYTGPTC ADERNPCDPT PCHISATCLV1620
 1621 LPEGGAMCAC PMGREGEFCE RVTEQDHTMP FLPEFNGFSY LELNGLQTLF LTCRQMSMEV1680
 1681 VFLAKSPSGM IFYNGQKTDG KGDFVSLALH DGYLEYRYDL GKGAAVLRSK EPVPLNTWIS1740
 1741 VLLERSGRKG VMRINNGERV MGESPKSRKV PHAFLNLKEP FYVGGAPDFS KLARAAAIST1800
 1801 SFYGAVQRIS IKGVPLLKEQ HIRSAVEIST FRAHPCTQKP NPCQNGGTCS PRLESYECAC1860
 1861 QRGFSGAHCE KVIIEKAAGD AEAIAFDGRT YMEYHNAVTK SPDALDYPAE PSEKALQSNH1920
 1921 FELSIKTEAT QGLILWSGKG LERSDYIALA IVDGFVQMMY DLGSKPVVLR STVPINTNHW1980
 1981 THIKAYRVQR EGSLQVGNEA PITGSSPLGA TQLDTDGALW LGGMERLSVA HKLPKAYSTG2040
 2041 FIGCIRDVIV DRQELHLVED ALNNPTILHC SAK

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