YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88683134
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIQRLPLLL VFLLISSLTL LAQSRSDTNH VYSPCADAKV QRSDGFSFGI AFASRTSFFV  60
   61 NSSVQLSPCD KRLSLSSANS QIAVFRPKVD EISLLTINTS SFFPDSYGGY MVAFAGRKYA 120
  121 ARSLPAFVAN GTFTVTSFTL VHEFKKGRLE NLYWKRDGCS SCSGNSNFVC LNGQDCAIRT 180
  181 NNCKNRGGNV DCSLGIQLTF SGTDKHASVF NSWFEVKNLR QYSLYGLYSN LRGSLTDQYN 240
  241 KFF

Type	Start	End	Confidence
Signal Peptide	1	24	0.97
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	243	0.99