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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-13
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLLLPYHP SEMLRQQRQI QMNWISYYLG NHPRCVLFSV FCVLIPLLSY FVIYPLEIEC  60
   61 DIRRGFANKH GHAVEELTKF SNFYNISVGG LEIWGVLARN KTTDTDLHIN LKLLNEIDQL 120
  121 HQFVWNYTTQ YKQETIRFKD LSSEDINYVF NYYRKLLAIE WMPGVNLSYP LAEAFGHPFY 180
  181 LGNQFFGVNN GQASKAGPIK TAKFVALWYM SKAETFEQKQ KLQAVQLGIF KKSAERPNNL 240
  241 QFDFEMFGDQ VANSEMLRGT LTTVKLFFIG GCLMVAFMAC TFTELTIFSK CMLIAGAIGS 300
  301 PLAATGACFA ILGWVGHPFN SIMCITPFLI LGIGVDDAFL LLNCWRREEG KDKSAKQAEN 360
  361 QLARVIREIS PSMAITSLTN TMAFGVGFLA PTPQMSSFCL GTALAIVLDF LLEFLIFVPC 420
  421 MVLFYKKKPE IIAIENEEFA NEKTEKRSET STGKYSRINW KCFTNLLLSV PGRVLVIILY 480
  481 FSIFTASYFG VAKMEKTFDP SKTFPSDSKL VDSLASFTSI QVEYSPLNFL SSVPDLKNDT 540
  541 DVANFNEMLH KLEFREECYG DVGSHNMYRD YVQFLNYSNI TDKSYNHLEK FLKGRGMADV 600
  601 GTIKYHKEGN DTIIDMINFV VVCQGREKWA ERAVNVEKTR QILVDYSDYN ITLFDYDGTI 660
  661 YDLIITVKGE LVKSLAITFT CMTIACFVIM PSFVAPTIAS VATVSISFCL IGFLSIWGQN 720
  721 LDPVTMIDVI MAIGFSVDYS AHVCYHYYCA REQHLGSKHE VITSVLQAVG RPVVEASLTT 780
  781 LLCMAPLFVV PVYMIQSFAK TVTLVTSFGL LHGLFFLPVV LYFIPLNAQK HSLPSYTPST 840
  841 QPLVSLVEDE K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle