YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111069060, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEVRKRANG SANGTAATKS TAEDHPYENI FLFIPNLIGY SRVVLAVASL YYMPLHPRTC  60
   61 SLLYSVSCLL DALDGYAARR FEQSTKFGAV LDMVTDRCTT TCLLVFLAQA FPRWSIVFQG 120
  121 LISLDLASHY MHMYATLSMG GSGQSHKNVD ESRSWILKQY YSNNKVLFTF CAMNEIFFIA 180
  181 LYLLSFSSPL LSPTLLGDKQ TPSSIQPGSP AAPKPSMFFT SPWSAGAMEM ARANKMDSTL 240
  241 PWILTLTSAP VMAIKQYINI VQMVKASQWL AEGDREARRL AGLPKPHKE

Type	Start	End	Confidence
Cytoplasmic	1	165	0.58
Transmembrane Helix	166	186	0.83
Non-Cytoplasmic	187	289	0.63