YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111067703, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLISAGAMI RSLSLFHITL AAVLLRNPQM IANQSIVMVL GQSMQLPTPR EFLKPSASIA  60
   61 FLAVLFAFLG LSDLTAISMS EELSDEYWGI ATPVRLLFLF ALTAYTYTFK DGGMFAPRSN 120
  121 DYMMSSGNTN LNNSIVFTWG FCEMAAWFWV FVTLRDERRE KVKKVVEKRA AEADRL

Type	Start	End	Confidence
Cytoplasmic	1	8	0.85
Transmembrane Helix	9	30	0.78
Non-Cytoplasmic	31	55	0.81
Transmembrane Helix	56	77	0.89
Cytoplasmic	78	86	0.87
Transmembrane Helix	87	109	0.86
Non-Cytoplasmic	110	134	0.87
Transmembrane Helix	135	154	0.92
Cytoplasmic	155	176	0.96