YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169601178, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWILPLLGYV GVILGFGFLT LAIASGLYYL SELVEEHTVL AKKLLYRLIY GVIVLQVLLL  60
   61 AVDGFPVGLS ALSIVSHAIY AQNLRKFPIV KLTDPLFLVS CALVIANHYL WFRHFSAPPP 120
  121 SSSYSSYPYS RDANIPSFTE IASYFGLCVW LVPFALFVSL SASENVLPSM GSEYATGEGS 180
  181 SYISAGKAPD AFASGTGSGV GGSSTGMEGK RRARSGTNAG LAKQVVTGVR EWVGETGEVM 240
  241 GFWKGERTRP TF

Type	Start	End	Confidence
Cytoplasmic	1	6	0.59
Transmembrane Helix	7	30	0.91
Non-Cytoplasmic	31	47	0.61
Transmembrane Helix	48	80	0.72
Cytoplasmic	81	91	0.61
Transmembrane Helix	92	112	0.89
Non-Cytoplasmic	113	140	0.70
Transmembrane Helix	141	162	0.85
Cytoplasmic	163	252	0.77