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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169603405, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQNVIVVGA GLSGLSAAHT IYLAGGNVVL LDKNNFMGGN STKATSGING ALTRTQVDHK  60
   61 IGDSVKQFYD DTLKSARDKA RPDLIKVLTY KSAAAVEWLM DVFNLDLTLV SRLGGHSQPR 120
  121 THRGHDAKFP GMAITYALMQ RFEELAEAEP ERVKLVKKAK VTSVNIENNR ALGVTYTFNG 180
  181 EETTLEGPVI LATGGYAADF TADSLLKKWR PDTYDLSTTN GAHATGDGHK MLMKVGANGI 240
  241 DMDKVQVHPT GLVDPKDPTA KTKFLAAEAL RGEGGILLNN KGKRFCDDLG HRDYVSGMMW 300
  301 EEKKKGQWPI RLVLNSKASN ILDFHTRHYS GRGLMKKMSG AELAKEIGVS DKDLQAEFQS 360
  361 YNAIAKGEKK DEWNKKFFHN LPFDINDTFH VAVMEPVLHF TMGGIEINDQ AQCLNSEGKP 420
  421 FDGLYVCGEL AGGVHGANRL GGSSLLGCVV YGRVAGDSAS KYLFQQALNS SGGSAVNRLG 480
  481 QISLHIDPSQ PGKVSVEWGN GVSTSQGATD GQSKVDQQKQ FSSAPVMSSN ADSNDPGKVS 540
  541 KPNKPSQFTI PDKEFSLEEI AKHNKKDDLW IAVKGIVMDV TNWTDEHPGG PQALFSHMGK 600
  601 DASEEFEMLH DDEVIPKYAP EIVIGRVKGQ EVTLEY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle