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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111067281
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMWAGSKNQ QNGDGLTAEP PHPIPQDDGA SRTSRRSYET SRRTHEPREE PTERTRLLDR  60
   61 PRPPNSDGYL DPDDPAVSPY NLWTVRAMRY LTILFLVVSF LWWVLLLVSI FVSPPGMHSR 120
  121 GSGFFDFAFT CLTIGNLLVA TIFFVTPAKG LRITTAIIAV LLAVDMIVIL AVPRIRLEEG 180
  181 WIGIASVVWA FLMAVWCILT DRVVAYGKRE EEERLTGRAE TRRTLKEWIA VLLATVLTVI 240
  241 FILIVILMTA TLGIRGRDST LKMYGDRILV DGDKYAVHLG CVGNVTHTDG QRDPTMLLEA 300
  301 GEEPLEYDLE HWAYSAYKNK TISRYCYWDR PGYAFSDNAP SPHSAGMSAD ALSEALAKAG 360
  361 EEGPWILVSA GTGSIVSRIF SSRHMKQVSG LLLVDPYHED LLHRIGSPSR GFLLWAWGII 420
  421 SPLGTVRLAG ALFKGRTRED RVYGRNAYQS GKFIKAQLQE NLVADSLSKS EVVSARNIQS 480
  481 ADTPLAIVSS GIEVKRDSEW ERKQKDLTKL TDNLVGWDVV NKAPHQVWQS LEGRTAMEKR 540
  541 LRQLVKAAGK IKSAEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle