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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111067278
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSETPAEPA HKSPALGETP DKPAEVEYDD FGLPIRKPRA RTPVVDSDEE EEEEEEEKFE  60
   61 DAVASKSAIK EDLALPDARE DVEVESKSQA HGDVPVKAEE GGNAPSQVNG YVKQAVEKIE 120
  121 HKEEIVKPVE AQEAVVEDNK PAEKAHSQEA VATAEVAAPD THVQSPETKQ HTSEVAGQSE 180
  181 SAEKDENPEA GEDSEPAKKD DSTQAAGQFK SAEKDKITET AQSSAHRQQQ SVASVSEYSH 240
  241 QHAVIQPPKE EKPFEDGGWQ TMPAYARYDM YDDDDKLIAK ENVEELEDMH GYANVGGAAK 300
  301 GYTRVIMDDD ADSVTSMDDN TAYLFKNKEA ALDEDDEELA RDPLAQMQTT KNLLTEGQRV 360
  361 AYVGLVRLAM VEMERKFIKM DRNRNTKKAL DLQQETTKMW AQKMMVRVYG HMDITTSEQV 420
  421 MIEQLSDHGV VPADLVPALM QNARVKNPVA EEVDSQADAD SARPSISSPR PDSKDEKHKS 480
  481 ASALSFDDSV KSPPPYEEQE GGFEYPDVKS PSQLPESKSL DIDLRWTVMC DLFLVLITDG 540
  541 VYDSRSRELF EQVGKYLSVD WLEICRFEKR VTDALEMQEQ ADKENWNEED HMKSRAKRAR 600
  601 NKRLAFMGIA TVGGGLVIGL SAGLLAPLIG AGLAAGFTTI GVAGTSGFLA GAGGAAVVTT 660
  661 TGVVTGATVG VRAANRRTGS VKTFEYRPLH NNKRTNLIIT LAGWMNGKVD DVRLPYSTVD 720
  721 PIMGDIYSVL WEPEMLRSMG DTINILATEA LTQGLQQVLA STILTTLMAA MTLPLALTKL 780
  781 SYLIDNPWVV SQARADMAGL VLADSLIDRN LGTRPITLVG FSLGARVIFS CLKELANRGA 840
  841 FGLVQNVYLF GTPVVAKNDE YIKARSVVPG RFVNGYATND WILGYLFRAT SGGVMRVAGL 900
  901 GQVQVPTIEN VNVTELVPGH MAYRTAMPKL LREVGWEVES DEFTEIEDPD PENHEQRQRE 960
  961 LISEIEEARK ELEKKAAEKE KKGSKISWWK RKKADKKEWE VYDETSQKHI KIDQDADPAK1020
 1021 IAETNIMFDI DAIRREVAAL SVDSKPYDAD ERDFEIKEIK STLPPMKIDL PPAPPPQSPL1080
 1081 RQTKSYNDSV GIATPDSKTN GTHDAAKKSF EEYDEGDAGE VEMTFDTSFA EPTPPPAIAK1140
 1141 SPLPRSGASS PWAGTPSRVS LADTRPAWSE PALPERPPLL TAKTAPLSGA GGEAMHNAWA1200
 1201 DEFEDEFGEE KEVKMSFM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle