YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VMA21_PHANO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTRRIIGQD GEEKTYLDVD PRGPPGPSNI SPAVPASVIW KLMSFTFAMI TLPIGTYFFT  60
   61 VNYVFGGNAT YAGALAAIMA NVVLIAYVIM AFKDDQAEQA EDAREAKKEL

Type	Start	End	Confidence
Cytoplasmic	1	37	0.97
Transmembrane Helix	38	61	0.86
Non-Cytoplasmic	62	68	0.83
Transmembrane Helix	69	91	0.91
Cytoplasmic	92	110	0.96